(Book Section)

Note: Accepted April 2009

Knabe, JF, Wegner, K, Nehaniv, CL, and Schilstra, MJ

Genetic Algorithms and their Application to in-silico Evolution of Genetic Regulatory Networks

In: Topics in Computational Biology (D Fenyo, Ed.)Series: Methods in Molecular Biology  (JM Walker, Ed.)

Humana Press

 

 

(Journal Article)

Note: Submitted May 2009

Schilstra, MJ, and Nehaniv, CL

A stochastic Petri-net model of gene transcription

BioSystems

 

 

(2009, Book Section)

Schilstra, MJ, and Martin, SR

Simple Stochastic Simulation

In: Methods in Enzymology: Computer Methods (Part B) (ML Johnson, and L Brand, Eds.), pp 381-409

Series: Methods in Enzymology, Vol. 467

Academic Press, Elsevier Inc.

doi: 10.1016/S0076-6879(09)67015-4

url: http://www.sciencedirect.com/science/article/B7CV2-4XN828M-R/2/795b2e526e8bb768b999d1b369ba6a5d

 

 

(2008, Book Section)

Eccleston, JF, Martin, SR, and Schilstra, MJ

Rapid Kinetic Techniques

In: Biophysical Tools for the Biologist (JJ Correia, and WH Dietrich, Eds.), pp 446-479

Series: Methods in Molecular Biology  (L Wilson, and PT Matsudaira, Eds.)

Elsevier Inc., San Diego

ISBN: 978-0-12372-520-2

url: http://www.sciencedirect.com/science/bookseries/0091679X

 

 

(2008, Book Section)

Schilstra, MJ, Martin, SR, and Keating, SM

Methods for simulating the dynamics of complex biological processes

In: Biophysical Tools for the Biologist (JJ Correia, and WH Dietrich, Eds.), pp 807-841

Series: Methods in Molecular Biology  (L Wilson, and PT Matsudaira, Eds.)

Elsevier Inc., San Diego

ISBN: 978-0-12372-520-2

url: http://www.sciencedirect.com/science/bookseries/0091679X

 

 

(2008, Book Section)

Martin, SR, and Schilstra, MJ

Circular dichroism and its application to the study of biomolecules

In: Biophysical tools for the biologist (JJ Correia, and WH Dietrich, Eds.), pp 263-293

Series: Methods in Molecular Biology  (L Wilson, and PT Matsudaira, Eds.)

Elsevier Inc., San Diego

ISBN: 978-0-12372-520-2

url: http://www.sciencedirect.com/science/bookseries/0091679X

 

 

(2008, Journal Article)

Schilstra, MJ, and Nehaniv, CL

Bio-Logic: Gene Expression and the Laws of Combinatorial Logic

Artificial Life 14, 121-133, 2008

ISSN: 1064-5462

doi: 10.1162/artl.2008.14.1.121

url: http://www.mitpressjournals.org/doi/abs/10.1162/artl.2008.14.1.121

 

 

(2008, Journal Article)

Knabe, JF, Nehaniv, CL, and Schilstra, MJ

Genetic Regulatory Network Models of Biological Clocks: Evolutionary History Matters

Artificial Life 14, 135-148, 2008

ISSN: 1064-5462

doi: 10.1162/artl.2008.14.1.135

url: http://www.mitpressjournals.org/doi/abs/10.1162/artl.2008.14.1.135

 

 

(2008, Journal Article)

Knabe, JF, Nehaniv, CL, and Schilstra, MJ

Do motifs reflect evolved function?--No convergent evolution of genetic regulatory network subgraph topologies

Biosystems 94, 68-74, 2008

ISSN: 0303-2647

doi: 10.1016/j.biosystems.2008.05.012

url: http://www.sciencedirect.com/science/article/B6T2K-4ST3YNH-7/2/59d5d067be2ee10ec7738faf9f7cc292

 

 

(2008, Journal Article)

Egri-Nagy, A, Nehaniv, CL, Rhodes, JL, and Schilstra, MJ

Automatic analysis of computation in biochemical reactions

Biosystems 94, 126-134, 2008

ISSN: 0303-2647

doi: 10.1016/j.biosystems.2008.05.018

url: http://www.sciencedirect.com/science/article/B6T2K-4ST3YNH-K/2/71078bbe8b0483e6427368d060e232f4

 

 

(2008, Conference Proceedings)

Knabe, JF, Schilstra, MJ, and Nehaniv, CL

Evolution and Morphogenesis of Differentiated Multicellular Organisms: Autonomously Generated Diffusion Gradients for Positional Information

In: Proc Artificial Life XI

 MIT Press

 

 

(2008, Conference Proceedings)

Knabe, JF, Nehaniv, CL, and Schilstra, MJ

Regulation of Gene Regulation - Smooth Binding with Dynamic Affinity affects Evolvability

In: Proc IEEE World Congress on Computational Intelligence, Hong Kong

 IEEE Press

 

 

(2007, Conference Proceedings)

Knabe, JF, Nehaniv, CL, and Schilstra, MJ

The Essential Motif That Wasn't There: Topological and Lesioning Analysis of Evolved Genetic Regulatory Networks

In: Proc First IEEE Symposium on Artificial Life, Hawaii, USA, pp 69-76

 

 

(2007, Book Section)

Shapiro, BE, Finney, A, Hucka, M, Bornstein, B, Funahashi, A, Jouraku, A, Keating, SM, Novère, NL, Matthews, J, and Schilstra, MJ

SBML Models and MathSBML

In: Introduction to Systems Biology (S Choi, Ed.), pp 395-421

 Humana Press, Totowa, NJ

ISBN: 978-1-58829-706-8

 

 

(2007, Journal Article)

Wegner, K, Knabe, JF, Robinson, M, Egri-Nagy, A, Schilstra, MJ, and Nehaniv, CL

The NetBuilder' project: development of a tool for constructing, simulating, evolving, and analysing complex regulatory networks

BMC Systems Biology 1, P72, 2007

ISSN: 1752-0509

doi: 10.1186/1752-0509-1-S1-P72

url: http://www.biomedcentral.com/1752-0509/1?issue=S1

 

 

(2007, Conference Proceedings)

Egri-Nagy, A, Nehaniv, CL, Rhodes, JL, and Schilstra, MJ

Krohn-Rhodes Analysis of Computation in BioChemical Reactions

In: Proc Seventh International Workshop on Information Processing in Cells and Tissues (IPCAT 2007), Jesus College, Oxford, pp 318-328

 ISBN: 978-80-87139-68-4

 

 

(2007, Conference Proceedings)

Knabe, JF, Nehaniv, CL, and Schilstra, MJ

Unruly Motifs - No Convergent Evolution of Network Topologies

In: Proc Seventh International Workshop on Information Processing in Cells and Tissues (IPCAT 2007), Jesus College, Oxford, pp 182-191

 ISBN: 978-80-87139-68-4

 

 

(2007, Conference Proceedings)

Stockton, DJ, Schilstra, MJ, Khalil, R, and McAuley, M

Biological control processes and their application to manufacturing planning

In: Proc Fifth International Conference on Manufacturing Research, De Montfort University, Leicester, UK (DJ Stockton, R Khalil, and R Baines, Eds.), pp 259-264

 De Montford University Press, Leicester, UK

ISBN: 978-0-9556714

 

 

(2006, Book Section)

Finney, A, Hucka, M, Bornstein, B, Keating, SM, Shapiro, BE, Matthews, J, Kovitz, BL, Schilstra, MJ, Funahashi, A, Doyle, JC, and Kitano, H

Software infrastructure for effective communication and reuse of computational models

In: System modeling in cellular biology (Z Szallasi, S Jörg, and V Periwal, Eds.), pp 355-378

 The MIT Press, Cambridge, MA

ISBN: 0-262-19548-8

 

 

(2006, Journal Article)

Le Novere, N, Bornstein, B, Broicher, A, Courtot, M, Donizelli, M, Dharuri, H, Li, L, Sauro, H, Schilstra, M, Shapiro, B, Snoep, JL, and Hucka, M

BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems

Nucl. Acids Res. 34, D689-691, 2006

ISSN: Print: 0305-1048 Electronic: 1362-4962

doi: 10.1093/nar/gkj092

url: http://nar.oxfordjournals.org/cgi/content/abstract/34/suppl_1/D689

 

 

(2006, Journal Article)

Schilstra, MJ, and Martin, SR

An elastically tethered viscous load imposes a regular gait on the motion of myosin-V. Simulation of the effect of transient force relaxation on a stochastic process

J. Royal. Soc. Interface 3, 153-165, 2006

ISSN: Print: 1742-5689 Electronic: 1742-5662

doi: 10.1098/rsif.2005.0098

url: http://www.journals.royalsoc.ac.uk/openurl.asp?genre=article&id=doi:10.1098/rsif.2005.0098

 

 

(2006, Journal Article)

Schilstra, MJ, Li, L, Matthews, J, Finney, A, Hucka, M, and Le Novere, N

CellML2SBML: conversion of CellML into SBML

Bioinformatics 22, 1018-1020, 2006

ISSN: Print: 1367-4803 Electronic:1460-2059

doi: 10.1093/bioinformatics/btl047

url: http://bioinformatics.oxfordjournals.org/cgi/content/abstract/22/8/1018

 

 

(2006, Conference Proceedings)

Knabe, JF, Nehaniv, CL, and Schilstra, MJ

Evolutionary Robustness of Differentiation in Genetic Regulatory Networks

In: Proc Seventh German Workshop on Artificial Life (GWAL 7), Jena, Germany, pp 75-84

 ISBN: 1-58603-644-0

 

 

(2006, Book Section)

Knabe, JF, Nehaniv, CL, Schilstra, MJ, and Quick, T

Evolving Biological Clocks using Genetic Regulatory Networks

In: Artificial Life X (LM Rocha, LS Yaeger, MA Bedau, D Floreano, RL Goldstone, and A Vespignani, Eds.), pp 15-21

 MIT Press, Boston, MA

ISBN: 0-262-68162-5

 

 

(2005, Conference Proceedings)

Schilstra, MJ, and Martin, SR

Nano-escapement: the motion of a molecular motor dragging a large viscous load is predicted to be regular and uniform

In: Proc 6th International Conference on Systems Biology (ICSB 2005), Harvard University, Boston, MA, USA, p 286

 

 

(2005, Conference Proceedings)

Hucka, M, Finney, A, Bornstein, B, Shapiro, BE, Keating, SM, Schilstra, MJ, Funahashi, A, Jouraku, A, Matthews, J, and Kovitz, B

Software from the SBML Team: LibSBML, MathSBML, SBMLToolbox, CellML2SBML, KEGG2SBML, SBML Test Suite, and the Online Tools

In: Proc International Conference on Systems Biology (ICSB), Harvard University, Boston, MA, USA, p 103

 

 

(2004, Book Section)

Bolouri, H, and Schilstra, MJ

Models of genetic regulatory networks

In: Computation in Cells. Perspectives and Tools of Thought (R Paton, H Bolouri, M Holcombe, JH Parish, and R Tateson, Eds.), pp 149-160

Series: Natural Computing Series Springer-Verlag, Berlin

ISBN: 3-540-00358-4

 

 

(2004, Journal Article)

Hucka, M, Finney, A, Bornstein, B, Keating, SM, Shapiro, BE, Matthews, J, Kovitz, B, Schilstra, MJ, Funahashi, A, Doyle, JC, and Kitano, H

Evolving a Lingua Franca and Associated Software Infrastructure for Computational Systems Biology: The Systems Biology Markup Language (SBML) Project

Systems Biology 1, 41-53, 2004

ISSN: Print: 1741-2471 Electronic: 1741-248X

url: http://dx.doi.org/10.1049/sb:20045008

 

 

(2004, Conference Proceedings)

Adams, R, te Boekhorst, R, Rust, AG, Kaye, P, and Schilstra, MJ

Design of Spatially Extended Neural Networks for Specific Applications

In: Proc IEEE International Joint Conference on Neural Networks (IJCNN04), Budapest, Hungary, pp 3101-3106

 IEEE Computer Society

ISBN: 0-7803-8360-5

 

 

(2003, Book Section)

Rust, AG, Adams, R, Schilstra, MJ, and Bolouri, H

Evolving computational neural systems using synthetic developmental mechanisms

In: On growth, form, and computers (P Bentley, and S Kumar, Eds.), pp 353-376

 Elsevier, Oxford, UK

ISBN: 978-0124287655

 

 

(2003, Journal Article)

Schilstra, MJ, Finney, A, Hucka, M, and Sauro, HM

Expressing biochemical network models in SBML

Fourth European Biophysics Conference Eur. Biophys. J. 32, 209, 2003

ISSN: Print: 0175-7571 Electronic: 1432-1017

 

 

(2003, Journal Article)

Abnizova, I, Schilstra, MJ, Boekhorst, Rt, and Nehaniv, CL

A statistical approach to distinguish between different DNA functional parts

WSEAS Trans. Comp. 2, 1180-1187, 2003

ISSN: 1109-2750

 

 

(2002, Journal Article)

Jeans, CJ, Schilstra, MJ, Ray, N, Husain, S, Minagawa, J, Nugent, JHA, and Klug, DR

Replacement of tyrosine D affects the normal electron/proton transfer pathways for the reduction of P680+ in oxygen-evolving Photosystem II particles from Chlamydomonas

Biochemistry 41, 15754-15761, 2002

ISSN: Print: 0006-2960 Electronic: 1520-4995

doi: 10.1021/bi020558e

url: url: http://dx.doi.org/10.1021/bi020558e

 

 

(2002, Journal Article)

Jeans, C, Schilstra, MJ, and Klug, DR

The temperature dependence of P680⁺ reduction in oxygen-evolving Photosystem II.

Biochemistry 41, 5015-5023, 2002

doi: 10.1021/bi0118862

url: http://dx.doi.org/10.1021/bi0118862

 

 

(2002, Journal Article)

Schilstra, MJ, Rust, AG, Adams, R, and Bolouri, H

A finite state automaton model for multi-neuron simulations

Neurocomputing 44 - 46C, 1141-1148, 2002

ISSN: 0925-2312

doi: 10.1016/S0925-2312(02)00438-1

url: http://www.sciencedirect.com/science/article/B6V10-45F90MH-T/2/b9aa84a205464363836a89dd184bdc53

 

 

(2002, Journal Article)

Davidson, EH, Rast, JP, Oliveri, P, Ransick, A, Calestani, C, Yuh, C-H, Minokawa, T, Amore, G, Hinman, V, Arenas-Mena, C, Otim, O, Brown, CT, Livi, CB, Lee, PY, Revilla, R, Schilstra, MJ, Clarke, PJC, Rust, AG, Pan, Z, Arnone, MI, Rowen, L, Cameron, RA, McClay, DR, Hood, L, and Bolouri, H

A provisonal regulatory gene network for specification of endomesoderm in the sea urchin embryo

Developmental Biology 246, 162-190, 2002

ISSN: 0012-1606

doi: 10.1006/dbio.2002.0635

url: http://www.sciencedirect.com/science/article/B6WDG-45WRK44-F/2/efb4a250a5717db1111e3da7d8cd50e2

 

 

(2002, Conference Proceedings)

Schilstra, MJ, and Bolouri, H

The logic of gene regulation

In: Proc 3rd International Conference on Systems Biology (ICSB): The Logic of Life, Karolinska Institutet, Stockholm, Sweden (E Aurell, J Elf, and J Jeppson, Eds.), pp 197-198

 Karolinska Institutet

ISBN: 91-85910-63-5

 

 

(2002, Journal Article)

Davidson, EH, Rast, JP, Oliveri, P, Ransick, A, Calestani, C, Yuh, C-H, Minokawa, T, Amore, G, Hinman, V, Arenas-Mena, C, Otim, O, Brown, CT, Livi, CB, Lee, PY, Revilla, R, Rust, AG, Pan, Zj, Schilstra, MJ, Clarke, PJC, Arnone, MI, Rowen, L, Cameron, RA, McClay, DR, Hood, L, and Bolouri, H

A Genomic Regulatory Network for Development

Science 295, 1669-1678, 2002

ISSN: 0036-8075

doi: 10.1126/science.1069883

url: http://www.sciencemag.org/cgi/content/abstract/295/5560/1669

 

 

(2002, Journal Article)

Brown, CT, Rust, AG, Clarke, PJC, Pan, Z, Schilstra, MJ, De Buysscher, T, Griffin, G, Wold, BJ, Cameron, RA, Davidson, EH, and Bolouri, H

New Computational Approaches for Analysis of cis-Regulatory Networks

Developmental Biology 246, 86-102, 2002

ISSN: 0012-1606

doi: 10.1006/dbio.2002.0619

url: http://www.sciencedirect.com/science/article/B6WDG-45WRK44-8/2/def3b58adf50a3ec4b287aa04a85c7bc

 

 

(2001, Journal Article)

Barter, LMC, Schilstra, MJ, Barber, J, Durrant, JR, and Klug, DR

Are the trapping dynamics in Photosystem II sensitive to QA redox potential?

Journal of Photochemistry and Photobiology A: Chemistry 142, 127, 2001

ISSN: 1010-6030

doi: 10.1016/S1010-6030(01)00506-8

url: http://www.sciencedirect.com/science/article/B6TGY-43X7TSG-5/2/437ad76f88ad77740e4cf2666a65ab32

 

 

(2001, Conference Proceedings)

Schilstra, MJ, and Bolouri, H

NetBuilder: a graphical tool for modelling genetic regulatory networks

In: Proc 2nd Workshop on Computation of Biochemical Pathways and Genetic Networks, Heidelberg, Germany (U Kummer, Ed.), p 15

 

 

(2001, Conference Proceedings)

Schilstra, MJ, and Bolouri, H

Logical modelling of developmental genetic regulatory networks with NetBuilder

In: Proc 2nd Int. Conf. Systems Biology (ICSB 2001), Los Angeles, CA (T-M Yi, M Hucka, M Morohashi, and H Kitano, Eds.), p 122

 Omnipress, Madison WI

 

 

(2001, Journal Article)

Barter, LMC, Bianchietti, M, Jeans, C, Schilstra, MJ, Hankamer, B, Diner, BA, Barber, J, Durrant, JR, and Klug, DR

Relationship between excitation energy transfer, trapping, and antenna size in photosystem II

Biochemistry 40, 4026-4034, 2001

ISSN: 0006-2960

doi: 10.1021/bi001724q

url: http://dx.doi.org/10.1021/bi001724q

 

 

(1999, Journal Article)

Schilstra, MJ, Hankamer, B, Dörner, W, Carradus, M, Barter, L, Barber, J, and Klug, DR

Similarity between electron donor side reactions in the solubilized Photosystem II-LHC II supercomplex and Photosystem-II-containing membranes.

Photosynth. Research 60, 191-198, 1999

 

 

(1998, Journal Article)

Schilstra, MJ, Rappaport, F, Nugent, J, Barnett, CJ, Barber, J, and Klug, DR

Proton/Hydrogen Transfer Affects the S-State-Dependent Microsecond Phases of P680+ Reduction during Water Splitting.

Biochemistry 37, 3974-3981, 1998

 

 

(1998, Journal Article)

Merry, SAP, Nixon, PL, Barter, LMC, Schilstra, MJ, Porter, G, Barber, J, Durrant, JR, and Klug, DR

Modulation of Quantum Yield of Primary Radical Pair Formation in Photosystem II by Site-Directed Mutagenesis Affecting Radical Cations and Anions.

Biochemistry 37, 17439-17447, 1998

 

 

(1996, Journal Article)

Schilstra, MJ, Nieuwenhuizen, WF, Veldink, GA, and J. F. G. Vliegenthart (1996) Biochemistry 35

Mechanism of Lipoxygenase Inactivation by the Linoleic Acid Analogue Octadeca-9,11-diynoic Acid.

Biochemistry 35, 3396-3401, 1996

 

 

(1995, Journal Article)

Heijdt, LMVD, Schilstra, MJ, Feiters, MC, Navaratnam, S, Nolting, H-F, Hermes, C, Veldink, GA, and Vliegenthart, JFG

Changes in the Iron Coordination Sphere of Fe(II) Lipoxygenase-1 from Soybeans upon Binding of Linoleate or Oleate.

Eur. J. Biochem. 231, 186-191, 1995

 

 

(1995, Journal Article)

Nieuwenhuizen, WF, Schilstra, MJ, Kerk, AVd, Brandsma, L, Veldink, GA, and Vliegenthart, JFG

Fe(III)-Lipoxygenase Converts its Suicide-type Inhibitor 9,12-Octadecadiynoic Acid into 11-Keto-9,12-Octadecadiynoic Acid.

Biochemistry 34, 10538-10545, 1995

 

 

(1995, Book Section)

Veldink, GA, Nieuwenhuizen, WF, Schilstra, MJ, and Vliegenthart, JFG

Stereoselective reactions of metal-activated molecules

In: Stereoselective reactions of metal-activated molecules (H Werner, and J Sundermeyer, Eds.), pp 27-32

 Friedr. Vieweg & Sohn Verlagsgesellschaft mbH, Braunschweig/Wiesbaden, Germany

 

 

(1994, Journal Article)

Vandecandelaere, A, Martin, SR, Schilstra, MJ, and Bayley, PM

The Effect of the Tubulin-Colchicin Complex on Microtubule Dynamic Instability.

Biochemistry 33, 2792-2801, 1994

 

 

(1994, Journal Article)

Schilstra, MJ, Veldink, GA, and Vliegenthart, JFG

The Dioxygenation Rate in Lipoxygenase Catalysis is Determined by the Amount of Iron(III) Lipoxygenase in Solution.

Biochemistry 33, 3974-3979, 1994

 

 

(1994, Journal Article)

Schilstra, MJ, Veldink, GA, and Vliegenthart, JFG

Effect of Non-ionic Detergents on the Lipoxygenase Reaction.

LIPIDS 29, 225-231, 1994

 

 

(1994, Conference Proceedings)

Nieuwenhuizen, WF, Schilstra, MJ, Veldink, GA, and Vliegenthart, JFG

Lipoxygenase inhibitors in studies on membrane peroxidation

In: Proc FEBS Advanced Course on Peroxidation in Biomembranes, Coimbra, Portugal

 

 

(1993, Journal Article)

Schilstra, MJ, Veldink, GA, and Vliegenthart, JFG

Kinetic Analysis of the Induction Period in Lipoxygenase Catalysis.

Biochemistry 32, 7686-7691, 1993

 

 

(1993, Journal Article)

Martin, SR, Schilstra, MJ, and Bayley, PM

Dynamic Instability of Microtubules: Monte-Carlo Simulation and Application to Different Types of Microtubule Lattice.

Biophys. J. 65, 578-596, 1993

 

 

(1993, Journal Article)

Bayley, PM, Martin, SR, and Schilstra, MJ

Interactions of Drugs with Dynamic Microtubules.

Cell. Pharmacol. 1, S1-S6, 1993

 

 

(1993, Conference Proceedings)

Vandecandelaere, A, Bayley, PM, Martin, SR, and Schilstra, MJ

The effect of the tubulin-colchicine complex on microtubule dynamic instability

In: Proc ESF Conference on the Biophysiscs of the Cytoskeleton, Giens, France

 

 

(1993, Conference Proceedings)

Schilstra, MJ, Vliegenthart, JFG, and Veldink, GA

 

In: Proc ESF Conference on the Chemistry of Metals in Biological Systems, Praia da Falesia, Portugal

 

 

(1993, Conference Proceedings)

Vandecandelaere, A, Martin, SR, Schilstra, MJ, and Bayley, PM

The effects of the tubulin-colchicin complex on microtubule dynamic instability

In: Proc 8th Annual Meeting of the European Cytoskeletal Forum, Assisi, Italy (R Pascolini, Ed.), p 92

 

 

(1992, Journal Article)

Schilstra, MJ, Veldink, GA, Verhagen, J, and Vliegenthart, JFG

Effect of Lipid Hydroperoxide on Lipoxygenase Kinetics.

Biochemistry 31, 7692-7699, 1992

 

 

(1991, Journal Article)

Martin, SR, Schilstra, MJ, and Bayley, PM

Opposite-end Behaviour of Dynamic Microtubules.

Biochim. Biophys. Acta 1073, 555-561, 1991

 

 

(1991, Journal Article)

Schilstra, MJ, Bayley, PM, and Martin, SR

The Effect of Solution Composition on Microtubule Dynamic Instability.

Biochem. J. 277, 839-847, 1991

 

 

(1990, Journal Article)

Bayley, PM, Schilstra, MJ, and Martin, SR

Microtubule Dynamic Instability: A Numerical Simulation of Experimental Microtubule Properties Using the Lateral Cap Model.

J. Cell Sci. 95, 33-48, 1990

 

 

(1990, Conference Proceedings)

Martin, SR, Schilstra, MJ, and Bayley, PM

Microtubule dynamic instability: computer simulation of the factors governing the stability of a non-equilibrium polymer

In: Proc 10th International Biophysics Congress, Vancouver, Canada

 

 

(1989, Journal Article)

Schilstra, MJ, Martin, SR, and Bayley, PM

The Effect of Podophyllotoxin on Microtubule Dynamics.

J. Biol. Chem. 264, 8827-8834, 1989

 

 

(1989, Journal Article)

Bayley, PM, Schilstra, MJ, and Martin, SR

A Simple Formulation of Microtubule Dynamics: Quantitative Implications of the Dynamic Instability of Microtubule Populations in vivo and in vitro.

J. Cell Sci. 93, 241-254, 1989

 

 

(1989, Journal Article)

Bayley, PM, Schilstra, MJ, and Martin, SR

A Lateral Cap Model of Microtubule Dynamic Instability.

FEBS Lett. 259, 181-184, 1989

 

 

(1988, Journal Article)

Bayley, PM, Schilstra, MJ, and Martin, SR

A minimal model for the assembly and dynamic instability of microtubules

Biophys. J. 53, 29a, 1988

 

 

(1988, Conference Proceedings)

Bayley, PM, Gal, V, Martin, SR, and Schilstra, MJ

Modelling dynamic microtubules

In: Proc 14th Taniguchi International Symposium, Kyoto, Japan (H Hotani, Ed.), pp 169-185

 

 

(1988, Book Section)

Schilstra, MJ, Martin, SR, and Bayley, PM

Dynamic processes in steady state microtubules studied by tubulin exchange kinetics

In: Structure and Functions of the Cytoskeleton (BA Rousset, Ed.), pp 43-49

Series: Colloq. INSERM John Libbey Eurotext, Paris, France

 

 

(1988, Book Section)

Bayley, PM, Gal, V, Karecla, P, Martin, SR, Schilstra, MJ, and Engelborghs, Y

Microtubule dynamics: experimental evidence and numerical modelling

In: Springer Series in Biophysiscs, pp 249-258

 Springer Verlag

 

(1987, Journal Article)

Schilstra, MJ, Martin, SR, and Bayley, PM

On the Relationship Between Nucleotide Hydrolysis and Microtubule Assembly: Studies with a GTP Regenerating System.

Biochem. Biophys. Research Comm. 147, 588-595, 1987

 

 

(1987, Journal Article)

Martin, SR, Schilstra, MJ, and Bayley, PM

Dynamic Properties of Microtubules at Steady State of Polymerization.

Biochem. Biophys. Research Comm. 149, 461-467, 1987

 

 

(1986, Journal Article)

Schilstra, MJ, Cremers, AFM, Bosch, L, and Mellema, JE

Three-dimensional Image Reconstruction of Helical Aggregates of Trypsin Modified Elongation Factor EF-Tu from Escherichia coli.

J. Ultrastruct. Research 94, 260-267, 1986

 

 

(1984, Journal Article)

Schilstra, MJ, Slot, JW, Meide, PHVd, Posthuma, G, Cremers, AFM, and Bosch, L

Immunocytochemical Localization of the Elongation Factor Tu in E. coli cells.

FEBS Lett. 165, 175-179, 1984

 

 

(1982, Journal Article)

Schilstra, MJ, Birker, PJMWL, Verschoor, GC, and Reedijk, J

Copper(I) and Copper(II) Compounds of 1,7-bis(2-benzimidazolyl)-2,6-dithiaheptane (BBDHp). X-Ray Structure of Linearly Coordinated Copper(I) in the Cation [CuI(BBDHp)]+.

Inorg. Chem. 21, 2637-2644, 1982

 

 

(1982, Conference Proceedings)

Cremers, AFM, Schilstra, MJ, Bosch, L, and Mellema, JE

Image analysis in molecular biology

In: Proc 10th International Congress on Electron Microscopy, Hamburg, FRG

 

 

(1980, Journal Article)

Cremers, AFM, Oostergetel, GT, Schilstra, MJ, and Mellema, JE

An Electron Microscopic Investigation of Alfalfa Mosaic Virus.

J. Mol. Biol. 145, 545-561, 1980

 

 

(1979, Journal Article)

Cremers, AFM, Fischer, JC, Schilstra, MJ, and Mellema, JE

Low-dose Image Reconstruction of Negatively Stained Contractile Phage Sheath from Bacillus subtilis (PBS-Z).

Ultramicroscopy 4, 395-412, 1979